Extract TCR:pMHC specificity data from raw source files (papers, supplementary tables, XLS, PDF, 10X output, AIRR-format) and produce a…
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5 agent skills — instructions the agent loads on demand. 5 of 5 are free. Median context cost 1.4k tokens.
Standardise a raw or partially-formatted VDJdb TSV chunk — normalising species names, IMGT V/D/J gene IDs, IMGT-HLA MHC alleles, and…
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Harmonize antigen.gene and antigen.species fields in a VDJdb chunk to canonical VDJdb naming.
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Identify and classify duplicate TCR records across all VDJdb chunks at three resolution levels (beta-only, paired, and same-epitope…
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For each new or changed chunk in chunks/ (by git), find or create a GitHub issue for its PMID, then commit the chunk with "Fixes #issue_id".
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