Environmental nanosafety skill for modeling nanomaterial environmental fate and transport
Analyzes environmental and climate data including temperature trends, pollution monitoring, ecological modeling, carbon footprint…
SSH job queue for multi-seed/multi-config ML experiments with OOM-aware retry, stale-screen cleanup, and wave-transition race prevention.
Embed proteins with Meta AI's ESM-2 (`fair-esm` package).
Classical end-to-end empirical analysis workflow in the modern tidyverse + econometrics R ecosystem — dplyr + tidyr + haven + fixest +…
AMD HIP and ROCm ecosystem for cross-platform GPU development.
Hugging Face Dataset Viewer
Use Hugging Face Hub via MCP server tools.
Trains and fine-tunes vision models for object detection, image classification and SAM segmentation using Hugging Face Transformers on…
HUMAnN functional profiling skill for metagenomic pathway analysis
Import DRAGEN-exported Illumina result bundles into ClawBio for local tertiary analysis and downstream routing.
Integer and mixed-integer programming skill for combinatorial optimization problems with discrete decision variables.
Julia-based econometric and structural estimation for computationally intensive tasks.
Jupyter notebook execution skill for running notebooks programmatically and extracting outputs.
Automate Kaggle tasks via Rube MCP (Composio).
Kraken2 taxonomic classification skill for rapid metagenomic read assignment
Kubeflow Pipelines skill for ML workflow orchestration, component management, and Kubernetes-native ML.
LAMMPS molecular dynamics simulation skill for atomistic simulations, force field setup, and large-scale parallel computations
Mathematical programming skill for formulating and solving linear programming models for resource allocation, production planning, and…
Loads internal CausalPy example datasets.
MAGeCK CRISPR screen analysis skill for gene essentiality scoring