QuTiP/quimb tensor network skill for quantum many-body simulations and entanglement analysis
Rasa NLU pipeline configuration and training for intent and entity extraction
RL training for robot control using simulation with sim-to-real transfer
ROOT/CERN data analysis skill for high-energy physics data processing, histogramming, and statistical analysis
BAM/SAM file manipulation skill for sorting, indexing, filtering, and extracting alignment data
Scanpy is a scalable Python toolkit for analyzing single-cell RNA-seq data, built on AnnData.
Machine learning: clustering, PCA/t-SNE/UMAP, classification, prediction regression (Ridge/Lasso/ensemble), cross-validation, Pipelines.
Local scVI/scANVI-based single-cell latent embedding and batch-aware integration from raw-count .h5ad or 10x
Deep learning for single-cell analysis using scvi-tools.
Seldon Core deployment skill for model serving, A/B testing, and canary deployments on Kubernetes.
Scanning Electron Microscopy with Energy Dispersive X-ray Spectroscopy skill for morphology and elemental analysis
Tail, read, or search a Stata log file from a previous command or background task.
Use when the user asks to run a full empirical / causal analysis in Python — by default in the style of an applied economics paper (AER /…
UV-Vis-NIR spectroscopy skill for optical property characterization including plasmon resonance and bandgap analysis
Workflow 1.5: Bridge between idea discovery and auto review.
Automate Wolfram Alpha API tasks via Rube MCP (Composio).
Atomic Force Microscopy and Scanning Probe Microscopy skill for nanoscale topography, mechanical, and electrical property mapping
AlphaFold protein structure prediction skill with confidence assessment and model analysis
Confirmatory hypothesis testing matched to pre-registration, with full assumption testing, effect sizes, confidence intervals, and APA 7th…
Parameterized quantum circuit (ansatz) design skill for variational algorithms
Create effective data visualizations with Python (matplotlib, seaborn, plotly).